Felix Rico, Laura Gonzalez, Ignacio Casuso, Manel Puig-Vidal, Simon Scheuring
The mechanical unfolding of the muscle protein titin by atomic force microscopy was a landmark in our understanding of single-biomolecule mechanics. Molecular dynamics simulations offered atomic-level descriptions of the forced unfolding. However, experiment and simulation could not be directly compared because they differed in pulling velocity by orders of magnitude. We have developed high-speed force spectroscopy to unfold titin at velocities reached by simulation (~4 millimeters per second). We found that a small β-strand pair of an immunoglobulin domain dynamically unfolds and refolds, buffering pulling forces up to ~100 piconewtons. The distance to the unfolding transition barrier is larger than previously estimated but is in better agreement with atomistic predictions. The ability to directly compare experiment and simulation is likely to be important in studies of biomechanical processes.
DOI
Thursday, December 19, 2013
Particle tracking by full-field complex wavefront subtraction in digital holography microscopy
Lisa Miccio, Pasquale Memmolo , Francesco Merola, Sabato Fusco, Antonio Paciello, Maurizio Ventre, Paolo Netti and Pietro Ferraro
3D tracking of micro-objects, based on digital holography, is proposed through the analysis of the complex wavefront of the light scattered by the micro-samples. Exploiting the advantages of the off-axis full-field holographic interferometry, tracking of multiple objects is achieved by a direct wavefront analysis at the focal plane overcoming the limitation of the conventional Back Focal Plane interferometry in which one object at time can be tracked. Furthermore, the method proposed and demonstrated here is a step-forward also in respect to other holographic tracking tools. The approach is tested in two experiments, one for investigating Brownian motion of particles trapped by holographic optical tweezers, while second is related to cells motility in 3D collagen matric thus showing its usefulness for lab-on-chip systems in typical bio-assay testing.
DOI
3D tracking of micro-objects, based on digital holography, is proposed through the analysis of the complex wavefront of the light scattered by the micro-samples. Exploiting the advantages of the off-axis full-field holographic interferometry, tracking of multiple objects is achieved by a direct wavefront analysis at the focal plane overcoming the limitation of the conventional Back Focal Plane interferometry in which one object at time can be tracked. Furthermore, the method proposed and demonstrated here is a step-forward also in respect to other holographic tracking tools. The approach is tested in two experiments, one for investigating Brownian motion of particles trapped by holographic optical tweezers, while second is related to cells motility in 3D collagen matric thus showing its usefulness for lab-on-chip systems in typical bio-assay testing.
DOI
Measurements of the Sensitivity of Aerosol Hygroscopicity and the κ Parameter to the O/C Ratio
Andrew M. J. Rickards , Rachael E. H. Miles , James F. Davies , Frances H. Marshall , and Jonathan P. Reid
We report measurements of the subsaturated hygroscopic growth of aerosol particles composed of single organic components of varying oxygen-to-carbon ratio up to relative humidities approaching saturation using the techniques of aerosol optical tweezers and an electrodynamic balance. The variation in the hygroscopicity parameter κ between compounds of even the same O/C ratio is found to be significant with, for example, a range in κ values from 0.12 to 0.38 for compounds with an O/C of 1. The measurements are compared with a review of all of the available literature data for which both the κ value and O/C ratio are reported, and a new parametrization is determined. Critical supersaturations predicted using this parametrization yield values that have associated uncertainties that are comparable to typical uncertainties in experimental measurements of critical supersaturations. However, the systematic variability between κ parametrizations determined from different studies remains large, consistent with the O/C ratio providing only an approximate guide to aerosol hygroscopicity and reflecting significant variations for aerosols of different chemical functionality, composition, and oxidation history.
DOI
We report measurements of the subsaturated hygroscopic growth of aerosol particles composed of single organic components of varying oxygen-to-carbon ratio up to relative humidities approaching saturation using the techniques of aerosol optical tweezers and an electrodynamic balance. The variation in the hygroscopicity parameter κ between compounds of even the same O/C ratio is found to be significant with, for example, a range in κ values from 0.12 to 0.38 for compounds with an O/C of 1. The measurements are compared with a review of all of the available literature data for which both the κ value and O/C ratio are reported, and a new parametrization is determined. Critical supersaturations predicted using this parametrization yield values that have associated uncertainties that are comparable to typical uncertainties in experimental measurements of critical supersaturations. However, the systematic variability between κ parametrizations determined from different studies remains large, consistent with the O/C ratio providing only an approximate guide to aerosol hygroscopicity and reflecting significant variations for aerosols of different chemical functionality, composition, and oxidation history.
DOI
Use of topological defects as templates to direct assembly of colloidal particles at nematic interfaces
Mohamed Amine Gharbi, Maurizio Nobili, Christophe Blanc
In this work, we experimentally investigate the ability of topological defects to guide interfacial assembly of spherical particles with homeotropic anchoring confined to nematic interfaces. We propose two different systems: In the first one, particles are trapped at an air/nematic interface where they spontaneously form various 2D patterns. We demonstrate that the phase transition between these patterns can be controlled by defects formed in the nematic bulk. In the second system, we explore the behavior of particles at the surface of bipolar nematic drops. We found that particles assemble into linear chains and interact with surface defects at the North and South poles of the drop, giving rise to the formation of star structures in a self-assembly process. We detail the mechanism that guides the behavior of particles and discuss the role of defects in the formation of the observed patterns.
DOI
In this work, we experimentally investigate the ability of topological defects to guide interfacial assembly of spherical particles with homeotropic anchoring confined to nematic interfaces. We propose two different systems: In the first one, particles are trapped at an air/nematic interface where they spontaneously form various 2D patterns. We demonstrate that the phase transition between these patterns can be controlled by defects formed in the nematic bulk. In the second system, we explore the behavior of particles at the surface of bipolar nematic drops. We found that particles assemble into linear chains and interact with surface defects at the North and South poles of the drop, giving rise to the formation of star structures in a self-assembly process. We detail the mechanism that guides the behavior of particles and discuss the role of defects in the formation of the observed patterns.
DOI
Radiation pressure efficiency measurements of nanoparticle coated microspheres
Soo Y. Kim, Joseph D. Taylor, Harold D. Ladouceur Sean J. Hart and Alex Terray
Experimental measurements of the radiation pressure efficiency (Qpr ) for several microparticles have been compared to theoretical calculations extrapolated from the Bohren-Huffman code for Mie scattering of coated particles. An increased shift of the Qpr parameter was observed for 2 μm SiO2 core particles coated with nanoparticles of higher refractive indices. Coatings of 14 nm melamine particles were found to increase the Qpr parameter 135 times over similar coatings using SiO2 particles of the same size. While a coating of 100 nm polystyrene particles also showed a significant increase, they did not agree well with theoretical values. It is hypothesized that other factors such as increased scatter, drag, and finite coating coverage are no longer negligible for coatings using nanoparticles in this size regime.
DOI
Experimental measurements of the radiation pressure efficiency (Qpr ) for several microparticles have been compared to theoretical calculations extrapolated from the Bohren-Huffman code for Mie scattering of coated particles. An increased shift of the Qpr parameter was observed for 2 μm SiO2 core particles coated with nanoparticles of higher refractive indices. Coatings of 14 nm melamine particles were found to increase the Qpr parameter 135 times over similar coatings using SiO2 particles of the same size. While a coating of 100 nm polystyrene particles also showed a significant increase, they did not agree well with theoretical values. It is hypothesized that other factors such as increased scatter, drag, and finite coating coverage are no longer negligible for coatings using nanoparticles in this size regime.
DOI
Quantum noise in optical tweezers
Michael A Taylor and Warwick P Bowen
Quantum enhanced sensitivity in optical tweezers based particle tracking was recently demonstrated. This has provided the necessary tool for quantum metrology to play an important role in biological measurements. Here we introduce the basic theory relevant to such optical tweezers experiments, and overview the significance of sub-shot noise limited sensitivity to practical experiments. In particular, biophysical experiments are subject to optical power constraints, which therefore limits the absolute sensitivity which is classically achievable. Quantum enhanced particle tracking can overcome this limit, and is therefore likely to play an important role in such biophysical experiments in the near future.
DOI
Quantum enhanced sensitivity in optical tweezers based particle tracking was recently demonstrated. This has provided the necessary tool for quantum metrology to play an important role in biological measurements. Here we introduce the basic theory relevant to such optical tweezers experiments, and overview the significance of sub-shot noise limited sensitivity to practical experiments. In particular, biophysical experiments are subject to optical power constraints, which therefore limits the absolute sensitivity which is classically achievable. Quantum enhanced particle tracking can overcome this limit, and is therefore likely to play an important role in such biophysical experiments in the near future.
DOI
Focused plasmonic trapping of metallic particles
Changjun Min, Zhe Shen, Junfeng Shen, Yuquan Zhang, Hui Fang, Guanghui Yuan, Luping Du, Siwei Zhu, Ting Lei & Xiaocong Yuan
Scattering forces in focused light beams push away metallic particles. Thus, trapping metallic particles with conventional optical tweezers, especially those of Mie particle size, is difficult. Here we investigate a mechanism by which metallic particles are attracted and trapped by plasmonic tweezers when surface plasmons are excited and focused by a radially polarized beam in a high-numerical-aperture microscopic configuration. This contrasts the repulsion exerted in optical tweezers with the same configuration. We believe that different types of forces exerted on particles are responsible for this contrary trapping behaviour. Further, trapping with plasmonic tweezers is found not to be due to a gradient force balancing an opposing scattering force but results from the sum of both gradient and scattering forces acting in the same direction established by the strong coupling between the metallic particle and the highly focused plasmonic field. Theoretical analysis and simulations yield good agreement with experimental results.
DOI
Scattering forces in focused light beams push away metallic particles. Thus, trapping metallic particles with conventional optical tweezers, especially those of Mie particle size, is difficult. Here we investigate a mechanism by which metallic particles are attracted and trapped by plasmonic tweezers when surface plasmons are excited and focused by a radially polarized beam in a high-numerical-aperture microscopic configuration. This contrasts the repulsion exerted in optical tweezers with the same configuration. We believe that different types of forces exerted on particles are responsible for this contrary trapping behaviour. Further, trapping with plasmonic tweezers is found not to be due to a gradient force balancing an opposing scattering force but results from the sum of both gradient and scattering forces acting in the same direction established by the strong coupling between the metallic particle and the highly focused plasmonic field. Theoretical analysis and simulations yield good agreement with experimental results.
DOI
Wednesday, December 18, 2013
Single and dual fiber nano-tip optical tweezers: trapping and analysis
Jean-Baptiste Decombe, Serge Huant, and Jochen Fick
An original optical tweezers using one or two chemically etched fiber nano-tips is developed. We demonstrate optical trapping of 1 micrometer polystyrene spheres at optical powers down to 2 mW. Harmonic trap potentials were found in the case of dual fiber tweezers by analyzing the trapped particle position fluctuations. The trap stiffness was deduced using three different models. Consistent values of up to 1 fN/nm were found. The stiffness linearly decreases with decreasing light intensity and increasing fiber tip-to-tip distance.
DOI
An original optical tweezers using one or two chemically etched fiber nano-tips is developed. We demonstrate optical trapping of 1 micrometer polystyrene spheres at optical powers down to 2 mW. Harmonic trap potentials were found in the case of dual fiber tweezers by analyzing the trapped particle position fluctuations. The trap stiffness was deduced using three different models. Consistent values of up to 1 fN/nm were found. The stiffness linearly decreases with decreasing light intensity and increasing fiber tip-to-tip distance.
DOI
Monday, December 16, 2013
Optimal Hydrodynamic Synchronization of Colloidal Rotors
Jurij Kotar, Luke Debono, Nicolas Bruot, Stuart Box, David Phillips, Stephen Simpson, Simon Hanna, and Pietro Cicuta
Synchronization of driven oscillators is a key aspect of flow generation in artificial and biological filaments such as cilia. Previous theoretical and numerical studies have considered the “rotor” model of a cilium in which the filament is coarse grained into a colloidal sphere driven with a given force law along a predefined trajectory to represent the oscillating motion of the cilium. These studies pointed to the importance of two factors in the emergence of synchronization: the modulation of the driving force around the orbit and the deformability of the trajectory. In this work it is shown via experiments, supported by numerical simulations and theory, that both of these factors are important and can be combined to produce strong synchronization (within a few cycles) even in the presence of thermal noise.
DOI
Synchronization of driven oscillators is a key aspect of flow generation in artificial and biological filaments such as cilia. Previous theoretical and numerical studies have considered the “rotor” model of a cilium in which the filament is coarse grained into a colloidal sphere driven with a given force law along a predefined trajectory to represent the oscillating motion of the cilium. These studies pointed to the importance of two factors in the emergence of synchronization: the modulation of the driving force around the orbit and the deformability of the trajectory. In this work it is shown via experiments, supported by numerical simulations and theory, that both of these factors are important and can be combined to produce strong synchronization (within a few cycles) even in the presence of thermal noise.
DOI
Timescales of water transport in viscous aerosol: measurements on sub-micron particles and dependence on conditioning history
Jessica W. Lu, Andrew M. J. Rickards, Jim S. Walker, Kerry J. Knox, Rachael E. H. Miles, Jonathan P. Reid and Ruth Signorell
Evaporation studies of single aqueous sucrose aerosol particles as a function of relative humidity (RH) are presented for coarse and fine mode particles down into the submicron size range (600 nm < r < 3.0 μm). These sucrose particles serve as a proxy for biogenic secondary organic aerosols that have been shown to exist, under ambient conditions, in an ultraviscous glassy state, which can affect the kinetics of water mass transport within the bulk phase and hinder particle response to changes in the gas phase water content. A counter-propagating Bessel beams (CPBBs) optical trapping setup is employed to monitor the real-time change in the particle radius with RH decreasing from 75% to 5%. The slow-down of the size change upon each RH step and the deviation from the theoretical equilibrium hygroscopic growth curve indicate the onset of glassy behavior in the RH range of 10–40%. Size-dependent effects were not observed within the uncertainty of the measurements. The influence of the drying time below the glass transition RH on the timescale of subsequent water condensation and re-equilibration for sucrose particles is explored by optical tweezers measurements of micron-sized particles (3 μm < r < 6 μm). The timescale for water condensation and re-equilibration is shown to increase with increasing drying time, i.e. the time over which a viscous particle is dried below 5% RH. These studies demonstrate the importance of the history of the particle conditioning on subsequent water condensation and re-equilibration dynamics of ultraviscous and glassy aerosol particles.
DOI
Evaporation studies of single aqueous sucrose aerosol particles as a function of relative humidity (RH) are presented for coarse and fine mode particles down into the submicron size range (600 nm < r < 3.0 μm). These sucrose particles serve as a proxy for biogenic secondary organic aerosols that have been shown to exist, under ambient conditions, in an ultraviscous glassy state, which can affect the kinetics of water mass transport within the bulk phase and hinder particle response to changes in the gas phase water content. A counter-propagating Bessel beams (CPBBs) optical trapping setup is employed to monitor the real-time change in the particle radius with RH decreasing from 75% to 5%. The slow-down of the size change upon each RH step and the deviation from the theoretical equilibrium hygroscopic growth curve indicate the onset of glassy behavior in the RH range of 10–40%. Size-dependent effects were not observed within the uncertainty of the measurements. The influence of the drying time below the glass transition RH on the timescale of subsequent water condensation and re-equilibration for sucrose particles is explored by optical tweezers measurements of micron-sized particles (3 μm < r < 6 μm). The timescale for water condensation and re-equilibration is shown to increase with increasing drying time, i.e. the time over which a viscous particle is dried below 5% RH. These studies demonstrate the importance of the history of the particle conditioning on subsequent water condensation and re-equilibration dynamics of ultraviscous and glassy aerosol particles.
DOI
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