Showing posts with label
Reports on Progress in Physics.
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Showing posts with label
Reports on Progress in Physics.
Show all posts
Yansheng Liang, Shaohui Yan, Zhaojun Wang, Runze Li, Yanan Cai, Minru He, Baoli Yao and Ming Lei
Optical trapping has become a powerful tool in numerous fields such as biology, physics, chemistry, etc. In standard optical trapping systems, trapping and imaging shares the same objective lens, confining the region of observation to the focal plane. To capture optical trapping processes occurring in other plane, especially the axial plane, many methods have been proposed to achieve this goal. Here, we review the methods of acquiring the axial-plane information from which axial plane trapping is observed and discuss their advantages and limitations. To overcome the limitations existing in these methods, we developed an optical tweezer system that allows for simultaneous optical trapping and imaging technique. The versatility and usefulness of the system in axial-plane trapping and imaging is demonstrated by investigating its trapping performance with various optical fields, including Bessel, Airy and snake-like beams. The potential applications of the proposed technique are suggested to several fields, including optical pulling, longitudinal optical binding, tomographic phase microscopy and superresolution microscopy.
DOI
Kun Zhao and Thomas G Mason
Advances in both top-down and bottom-up sytheses of a wide variety of complex colloidal building blocks and also in methods of controlling their assembly in solution have led to new and interesting forms of highly controlled soft matter. In particular, top-down lithographic methods of producing monodisperse colloids now provide precise human-designed control over their sub-particle features, opening up a wide range of new possibilities for assembly structures that had been previously limited by the range of shapes available through bottom-up methods. Moreover, an increasing level of control over anisotropic interactions between these colloidal building blocks, which can be tailored through local geometries of sub-particle features as well as site-specific surface modifications, is giving rise to new demonstrations of massively parallel off-chip self-assembly of specific target structures with low defect rates. In particular, new experimental realizations of hierarchical self-assembly and control over the chiral purity of resulting assembly structures have been achieved. Increasingly, shape-dependent, shape-complementary, and roughness-controlled depletion attractions between non-spherical colloids are being used in novel ways to create assemblies that go far beyond fractal clusters formed by diffusion-limited and reaction-limited aggregation of spheres. As self-assembly methods have progressed, a wide variety of advanced directed assembly methods have also been developed; approaches based on microfluidic control and applying structured electromagnetic fields are particularly promising.
DOI
Azra Bahadori, Guillermo Moreno-Pescador, Lene B Oddershede and Poul M Bendix
Remote control over fusion of single cells and vesicles has a great potential in biological and chemical research allowing both transfer of genetic material between cells and transfer of molecular content between vesicles. Membrane fusion is a critical process in biology that facilitates molecular transport and mixing of cellular cytoplasms with potential formation of hybrid cells. Cells precisely regulate internal membrane fusions with the aid of specialized fusion complexes that physically provide the energy necessary for mediating fusion. Physical factors like membrane curvature, tension and temperature, affect biological membrane fusion by lowering the associated energy barrier. This has inspired the development of physical approaches to harness the fusion process at a single cell level by using remotely controlled electromagnetic fields to trigger membrane fusion. Here, we critically review various approaches, based on lasers or electric pulses, to control fusion between individual cells or between individual lipid vesicles and discuss their potential and limitations for present and future applications within biochemistry, biology and soft matter.
DOI
Helen Miller, Zhaokun Zhou, Jack Shepherd, Adam J M Wollman and Mark C Leake
Single-molecule biophysics has transformed our understanding of biology, but also of the physics of life. More exotic than simple soft matter, biomatter lives far from thermal equilibrium, covering multiple lengths from the nanoscale of single molecules to up to several orders of magnitude higher in cells, tissues and organisms. Biomolecules are often characterized by underlying instability: multiple metastable free energy states exist, separated by levels of just a few multiples of the thermal energy scale k B T, where k B is the Boltzmann constant and T absolute temperature, implying complex inter-conversion kinetics in the relatively hot, wet environment of active biological matter. A key benefit of single-molecule biophysics techniques is their ability to probe heterogeneity of free energy states across a molecular population, too challenging in general for conventional ensemble average approaches. Parallel developments in experimental and computational techniques have catalysed the birth of multiplexed, correlative techniques to tackle previously intractable biological questions. Experimentally, progress has been driven by improvements in sensitivity and speed of detectors, and the stability and efficiency of light sources, probes and microfluidics. We discuss the motivation and requirements for these recent experiments, including the underpinning mathematics. These methods are broadly divided into tools which detect molecules and those which manipulate them. For the former we discuss the progress of super-resolution microscopy, transformative for addressing many longstanding questions in the life sciences, and for the latter we include progress in 'force spectroscopy' techniques that mechanically perturb molecules. We also consider in silico progress of single-molecule computational physics, and how simulation and experimentation may be drawn together to give a more complete understanding. Increasingly, combinatorial techniques are now used, including correlative atomic force microscopy and fluorescence imaging, to probe questions closer to native physiological behaviour. We identify the trade-offs, limitations and applications of these techniques, and discuss exciting new directions.
DOI
Sergey Sukhov and Aristide Dogariu
Undoubtedly, laser tweezers are the most recognized application of optically induced mechanical action. Their operation is usually described in terms of conservative forces originating from intensity gradients. However, the fundamental optical action on matter is non-conservative. We will review different manifestations of non-conservative optical forces (NCF) and discuss their dependence on the specific spatial properties of optical fields that generate them. New developments relevant to the NCF such as tractor beams and transversal forces are also discussed.
DOI
Karl Otto Greulich
The use of laser microbeams and optical tweezers in a wide field of biological applications from genomic to immunology is discussed. Microperforation is used to introduce a well-defined amount of molecules into cells for genetic engineering and optical imaging.
The microwelding of two cells induced by a laser microbeam combines their genetic outfit.
Microdissection allows specific regions of genomes to be isolated from a whole set of chromosomes. Handling the cells with optical tweezers supports investigation on the attack of immune systems against diseased or cancerous cells. With the help of laser microbeams, heart infarction can be simulated, and optical tweezers support studies on the heartbeat. Finally, laser microbeams are used to induce DNA damage in living cells for studies on cancer and ageing.
DOI
Thomas Andrew Waigh
New developments in the microrheology of complex fluids are considered. Firstly the requirements for a simple modern particle tracking microrheology experiment are introduced, the error analysis methods associated with it and the mathematical techniques required to calculate the linear viscoelasticity. Progress in microrheology instrumentation is then described with respect to detectors, light sources, colloidal probes, magnetic tweezers, optical tweezers, diffusing wave spectroscopy, optical coherence tomography, fluorescence correlation spectroscopy, elastic- and quasi-elastic scattering techniques, 3D tracking, single molecule methods, modern microscopy methods and microfluidics. New theoretical techniques are also reviewed such as Bayesian analysis, oversampling, inversion techniques, alternative statistical tools for tracks (angular correlations, first passage probabilities, the kurtosis, motor protein step segmentation etc), issues in micro/macro rheological agreement and two particle methodologies. Applications where microrheology has begun to make some impact are also considered including semi-flexible polymers, gels, microorganism biofilms, intracellular methods, high frequency viscoelasticity, comb polymers, active motile fluids, blood clots, colloids, granular materials, polymers, liquid crystals and foods. Two large emergent areas of microrheology, non-linear microrheology and surface microrheology are also discussed.
DOI
Max Bethune-Waddell and Kenneth J Chau
Consensus on a single electrodynamic theory has yet to be reached. Discord was seeded over a century ago when Abraham and Minkowski proposed different forms of electromagnetic momentum density and has since expanded in scope with the gradual introduction of other forms of momentum and force densities. Although degenerate sets of electrodynamic postulates can be fashioned to comply with global energy and momentum conservation, hope remains to isolate a single theory based on detailed comparison between force density predictions and radiation pressure experiments. This comparison is two-fold challenging because there are just a handful of quantitative radiation pressure measurements over the past century and the solutions developed from different postulates, which consist of approximate expressions and inferential deductions, are scattered throughout the literature. For these reasons, it is appropriate to conduct a consolidated and comprehensive re-analysis of past experiments under the assumption that the momentum and energy of light in matter are degenerate. We create a combined electrodynamic/fluid dynamic simulation testbed that uses five historically significant sets of electrodynamic postulates, including those by Abraham and Minkowski, to model radiation pressure under diverse configurations with minimal assumptions. This leads to new interpretations of landmark investigations of light momentum, including the Balazs thought experiment, the Jones–Richards and Jones–Leslie measurements of radiation pressure on submerged mirrors, observations of laser-deformed fluid surfaces, and experiments on optical trapping and tractor beaming of dielectric particles. We discuss the merits and demerits of each set of postulates when compared to available experimental evidence and fundamental conservation laws. Of the five sets of postulates, the Abraham and Einstein–Laub postulates provide the greatest consistency with observations and the most physically plausible descriptions of electrodynamic interactions. Force density predictions made by these two postulates are unique under many conditions and their experimental isolation is potentially within reach.
DOI
Donald J Sirbuly, Raymond W Friddle, Joshua Villanueva and Qian Huang
Over the past couple of decades there has been a tremendous amount of progress on the development of ultrasensitive nanomechanical instruments, which has enabled scientists to peer for the first time into the mechanical world of biomolecular systems. Currently, work-horse instruments such as the atomic force microscope and optical/magnetic tweezers have provided the resolution necessary to extract quantitative force data from various molecular systems down to the femtonewton range, but it remains difficult to access the intracellular environment with these analytical tools as they have fairly large sizes and complicated feedback systems. This review is focused on highlighting some of the major milestones and discoveries in the field of biomolecular mechanics that have been made possible by the development of advanced atomic force microscope and tweezer techniques as well as on introducing emerging state-of-the-art nanomechanical force transducers that are addressing the size limitations presented by these standard tools. We will first briefly cover the basic setup and operation of these instruments, and then focus heavily on summarizing advances in in vitro force studies at both the molecular and cellular level. The last part of this review will include strategies for shrinking down the size of force transducers and provide insight into why this may be important for gaining a more complete understanding of cellular activity and function.
DOI
Rory M Power and Jonathan P Reid
The use of optical trapping techniques to manipulate probe particles for performing micro-rheological measurements on a surrounding fluid is well-established. Here, we review recent advances made in the use of optical trapping to probe the rheological properties of trapped particles themselves. In particular, we review observations of the continuous transition from liquid to solid-like viscosity of sub-picolitre supersaturated solution aerosol droplets using optical trapping techniques. Direct measurements of the viscosity of the particle bulk are derived from the damped oscillations in shape following coalescence of two particles, a consequence of the interplay between viscous and surface forces and the capillary driven relaxation of the approximately spheroidal composite particle. Holographic optical tweezers provide a facile method for the manipulation of arrays of particles allowing coalescence to be controllably induced between two micron-sized aerosol particles. The optical forces, while sufficiently strong to confine the composite particle, are several orders of magnitude weaker than the capillary forces driving relaxation. Light, elastically back-scattered by the particle, is recorded with sub-100 ns resolution allowing measurements of fast relaxation (low viscosity) dynamics, while the brightfield image can be used to monitor the shape relaxation extending to times in excess of 1000 s. For the slowest relaxation dynamics studied (particles with the highest viscosity) the presence and line shape of whispering gallery modes in the cavity enhanced Raman spectrum can be used to infer the relaxation time while serving the dual purpose of allowing the droplet size and refractive index to be measured with accuracies of ±0.025% and ±0.1%, respectively. The time constant for the damped relaxation can be used to infer the bulk viscosity, spanning from the dilute solution limit to a value approaching that of a glass, typically considered to be >1012 Pa s, whilst the frequencies of the normal modes of the oscillations of the particle can be used to infer surface properties. We will review the use of optical tweezers for studying the viscosity of aerosol particles and discuss the potential use of this micro-rheological tool for probing the fundamental concepts of phase, thermodynamic equilibrium and metastability.
DOI
Richard W Bowman and Miles J Padgett
The phenomenon of light's momentum was first observed in the laboratory at the beginning of the twentieth century, and its potential for manipulating microscopic particles was demonstrated by Ashkin some 70 years later. Since that initial demonstration, and the seminal 1986 paper where a single-beam gradient-force trap was realized, optical trapping has been exploited as both a rich example of physical phenomena and a powerful tool for sensitive measurement. This review outlines the underlying theory of optical traps, and explores many of the physical observations that have been made in such systems. These phenomena include 'optical binding', where trapped objects interact with one another through the trapping light field. We also discuss a number of the applications of 'optical tweezers' across the physical and life sciences, as well as covering some of the issues involved in constructing and using such a tool.
DOI
