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Thursday, January 21, 2016

Optical Pushing: A Tool for Parallelized Biomolecule Manipulation

Gerrit Sitters, Niels Laurens, Emilie J. de Rijk, Holger Kress, Erwin J.G. Peterman, Gijs J.L. Wuite

The ability to measure and manipulate single molecules has greatly advanced the field of biophysics. Yet, the addition of more single-molecule tools that enable one to measure in a parallel fashion is important to diversify the questions that can be addressed. Here we present optical pushing (OP), a single-molecule technique that is used to exert forces on many individual biomolecules tethered to microspheres using a single collimated laser beam. Forces ranging from a few femtoNewtons to several picoNewtons can be applied with a submillisecond response time. To determine forces exerted on the tethered particles by the laser, we analyzed their measured Brownian motion using, to our knowledge, a newly derived analytical model and numerical simulations. In the model, Brownian rotation of the microspheres is taken into account, which proved to be a critical component to correctly determine the applied forces. We used our OP technique to map the energy landscape of the protein-induced looping dynamics of DNA. OP can be used to apply loading rates in the range of 10−4–106 pN/s to many molecules at the same time, which makes it a tool suitable for dynamic force spectroscopy.

DOI

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